Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1G3Q9Y6M4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 REXO1L6P-201ENST00000603433 1515 ntBASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 DRD5P1-201ENST00000456605 1438 ntBASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 TUBB1P2-201ENST00000422712 1306 ntBASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 TUBB1P1-201ENST00000503144 1300 ntBASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 AL136379.1-201ENST00000623471 2642 ntBASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 AC016694.1-201ENST00000434179 700 ntBASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.28■□□□□ 0.04
CSNK1G3Q9Y6M4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 AC099336.1-201ENST00000417053 1171 ntBASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 FAM21FP-201ENST00000426241 1131 ntBASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 AC022137.2-201ENST00000503482 481 ntBASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.27■□□□□ 0.04
CSNK1G3Q9Y6M4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1G3Q9Y6M4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms