Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 TMEM14DP-201ENST00000422205 345 ntBASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 TPRX2P-201ENST00000535362 881 ntBASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 SRD5A3P1-201ENST00000603021 949 ntBASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AC067930.6-201ENST00000623257 4947 ntBASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 Z97205.2-201ENST00000564697 1639 ntBASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 PPT1-215ENST00000641471 2368 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 MYCLP2-201ENST00000449268 967 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AL589987.1-201ENST00000453380 819 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC023310.3-201ENST00000557027 670 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC100756.1-201ENST00000562736 682 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC138749.3-201ENST00000567691 622 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 CTBP2P3-201ENST00000585629 1255 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC025048.3-201ENST00000590609 569 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC116165.1-201ENST00000611806 668 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC005702.4-201ENST00000618393 416 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC004461.2-201ENST00000629517 803 ntBASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHB1Q9Y5F3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms