Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 RN7SL399P-201ENST00000471648 279 ntBASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 RNA5SP412-201ENST00000516234 123 ntBASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 MIR4538-201ENST00000581377 78 ntBASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 TSPY26P-202ENST00000565928 3884 ntBASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 AC018665.1-201ENST00000622927 1362 ntBASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 ACTG1P3-201ENST00000431775 1114 ntBASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 KLF2P4-201ENST00000451959 1225 ntBASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 SLC25A47P1-201ENST00000531577 414 ntBASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.1■□□□□ 0.81
PDZRN3Q9UPQ7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 KRT8P44-201ENST00000441609 1350 ntBASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 AL355994.2-201ENST00000447882 704 ntBASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 RPSAP52-203ENST00000622976 1023 ntBASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 KRT8P22-201ENST00000562317 1415 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms