Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AC134915.1-201ENST00000426461 574 ntBASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 KRT17P7-201ENST00000451704 1104 ntBASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AL033527.5-201ENST00000641382 801 ntBASIC15.69■□□□□ 0.1
DKK3Q9UBP4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.69■□□□□ 0.1
DKK3Q9UBP4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DKK3Q9UBP4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 INTS4P2-202ENST00000614726 2019 ntBASIC15.68■□□□□ 0.1
DKK3Q9UBP4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 AL162726.2-201ENST00000438986 1017 ntBASIC15.68■□□□□ 0.1
DKK3Q9UBP4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.68■□□□□ 0.1
DKK3Q9UBP4 AC026410.3-201ENST00000514280 936 ntBASIC15.68■□□□□ 0.1
DKK3Q9UBP4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DKK3Q9UBP4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DKK3Q9UBP4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms