Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 BTNL10-201ENST00000595971 695 ntBASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 AC093813.1-201ENST00000605066 256 ntBASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 AC017083.2-201ENST00000608069 979 ntBASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 USP32P1-208ENST00000506594 1164 ntBASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AC233724.13-201ENST00000598383 410 ntBASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AC107373.2-201ENST00000607735 490 ntBASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 AC026691.1-201ENST00000602502 2017 ntBASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 PRAL-201ENST00000624952 3286 ntBASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CPNE7Q9UBL6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 AC234783.1-201ENST00000441761 496 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 PTP4A1P2-201ENST00000546033 454 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 AP001063.1-201ENST00000568332 529 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 AC009486.1-201ENST00000569860 813 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 CLUHP6-201ENST00000580789 941 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms