Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 AL512356.2-201ENST00000546955 174 ntBASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NEUROD4Q9HD90 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 CETN4P-206ENST00000642099 2168 ntBASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 AC011270.2-201ENST00000624293 2550 ntBASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 AL079307.3-201ENST00000556114 283 ntBASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 MIR6069-201ENST00000620069 79 ntBASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 AC148477.4-201ENST00000613430 1793 ntBASIC14.78□□□□□ -0.04
NEUROD4Q9HD90 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NEUROD4Q9HD90 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms