Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.65■□□□□ 0.74
SHANK3Q9BYB0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.65■□□□□ 0.74
SHANK3Q9BYB0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.65■□□□□ 0.74
SHANK3Q9BYB0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.65■□□□□ 0.74
SHANK3Q9BYB0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHANK3Q9BYB0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHANK3Q9BYB0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.64■□□□□ 0.74
SHANK3Q9BYB0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.64■□□□□ 0.74
SHANK3Q9BYB0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHANK3Q9BYB0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHANK3Q9BYB0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHANK3Q9BYB0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 AC020910.5-201ENST00000623668 1865 ntBASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 TUBB8P8-201ENST00000458717 1058 ntBASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 RPL18P13-201ENST00000478088 569 ntBASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 RPL17P45-201ENST00000586289 509 ntBASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHANK3Q9BYB0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 RPSAP31-201ENST00000416648 895 ntBASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 NOC2LP1-201ENST00000450578 752 ntBASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 AC104073.2-201ENST00000453737 312 ntBASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 RN7SL67P-201ENST00000492147 296 ntBASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 FZD10-202ENST00000539839 3282 ntBASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.63■□□□□ 0.73
SHANK3Q9BYB0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AC006058.4-201ENST00000624016 1670 ntBASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AC011491.1-203ENST00000637688 543 ntBASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 DUX4L46-201ENST00000566845 751 ntBASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 AC006453.1-201ENST00000636037 1257 ntBASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.62■□□□□ 0.73
SHANK3Q9BYB0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK3Q9BYB0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK3Q9BYB0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHANK3Q9BYB0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms