Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC10.39□□□□□ -0.75
LITAFQ99732 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 NUS1P2-201ENST00000417358 873 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 DUSP5P1-201ENST00000441325 1139 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 TSSC2-201ENST00000450217 709 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 AC132008.2-207ENST00000454517 770 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 TPT1P11-201ENST00000458482 498 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 TMEM198B-204ENST00000484016 896 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 KRT18P34-201ENST00000488218 1270 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 RIN3-211ENST00000557762 517 ntTSL 3 BASIC10.39□□□□□ -0.75
LITAFQ99732 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 AC069148.1-201ENST00000608741 768 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.39□□□□□ -0.75
LITAFQ99732 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC10.39□□□□□ -0.75
LITAFQ99732 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.39□□□□□ -0.75
LITAFQ99732 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
LITAFQ99732 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 AC084364.1-201ENST00000551967 1556 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LITAFQ99732 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.39□□□□□ -0.75
LITAFQ99732 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.38□□□□□ -0.75
LITAFQ99732 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 AC005562.1-201ENST00000583030 3219 ntBASIC10.38□□□□□ -0.75
LITAFQ99732 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 AC016397.2-201ENST00000624848 1985 ntBASIC10.38□□□□□ -0.75
LITAFQ99732 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 RBM17P3-201ENST00000417687 1192 ntBASIC10.38□□□□□ -0.75
LITAFQ99732 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC10.38□□□□□ -0.75
LITAFQ99732 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.38□□□□□ -0.75
LITAFQ99732 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 AP002414.4-201ENST00000589764 1148 ntBASIC10.38□□□□□ -0.75
LITAFQ99732 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.38□□□□□ -0.75
LITAFQ99732 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 MTDHP4-201ENST00000600287 670 ntBASIC10.38□□□□□ -0.75
LITAFQ99732 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
LITAFQ99732 AP006294.2-201ENST00000641667 209 ntBASIC10.38□□□□□ -0.75
LITAFQ99732 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms