Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAD9AQ99638 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.5■□□□□ 0.23
RAD9AQ99638 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 AC007787.1-201ENST00000588095 1583 ntBASIC16.5■□□□□ 0.23
RAD9AQ99638 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.5■□□□□ 0.23
RAD9AQ99638 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.49■□□□□ 0.23
RAD9AQ99638 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.49■□□□□ 0.23
RAD9AQ99638 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RAD9AQ99638 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.49■□□□□ 0.23
RAD9AQ99638 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.49■□□□□ 0.23
RAD9AQ99638 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 AC011742.3-201ENST00000439053 820 ntBASIC16.49■□□□□ 0.23
RAD9AQ99638 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.49■□□□□ 0.23
RAD9AQ99638 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.49■□□□□ 0.23
RAD9AQ99638 AC021723.1-201ENST00000486306 515 ntBASIC16.49■□□□□ 0.23
RAD9AQ99638 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.49■□□□□ 0.23
RAD9AQ99638 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.49■□□□□ 0.23
RAD9AQ99638 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.49■□□□□ 0.23
RAD9AQ99638 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.49■□□□□ 0.23
RAD9AQ99638 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RAD9AQ99638 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAD9AQ99638 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RAD9AQ99638 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAD9AQ99638 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAD9AQ99638 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAD9AQ99638 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.48■□□□□ 0.23
RAD9AQ99638 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.48■□□□□ 0.23
RAD9AQ99638 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.48■□□□□ 0.23
RAD9AQ99638 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 CHMP1AP1-201ENST00000445563 662 ntBASIC16.48■□□□□ 0.23
RAD9AQ99638 HIST2H2BB-201ENST00000449108 381 ntBASIC16.48■□□□□ 0.23
RAD9AQ99638 EEF1DP6-201ENST00000449232 372 ntBASIC16.48■□□□□ 0.23
RAD9AQ99638 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.48■□□□□ 0.23
RAD9AQ99638 AC100850.1-201ENST00000506768 649 ntBASIC16.48■□□□□ 0.23
RAD9AQ99638 AC024681.1-201ENST00000521917 487 ntBASIC16.48■□□□□ 0.23
RAD9AQ99638 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.48■□□□□ 0.23
RAD9AQ99638 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.48■□□□□ 0.23
RAD9AQ99638 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.48■□□□□ 0.23
RAD9AQ99638 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RAD9AQ99638 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.48■□□□□ 0.23
RAD9AQ99638 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.48■□□□□ 0.23
RAD9AQ99638 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAD9AQ99638 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.48■□□□□ 0.23
RAD9AQ99638 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
RAD9AQ99638 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 KRT8P29-201ENST00000420409 1371 ntBASIC16.48■□□□□ 0.23
RAD9AQ99638 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAD9AQ99638 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAD9AQ99638 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
RAD9AQ99638 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAD9AQ99638 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.48■□□□□ 0.23
RAD9AQ99638 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAD9AQ99638 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms