Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 AC104581.4-201ENST00000623126 3052 ntBASIC12.73□□□□□ -0.37
RAB40CQ96S21 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 AL031008.1-201ENST00000619963 541 ntBASIC12.72□□□□□ -0.37
RAB40CQ96S21 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB40CQ96S21 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB40CQ96S21 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.71□□□□□ -0.37
RAB40CQ96S21 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 KRT18P67-201ENST00000432816 1264 ntBASIC12.71□□□□□ -0.37
RAB40CQ96S21 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms