Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.3■□□□□ 0.84
NBPF4Q96M43 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF4Q96M43 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.29■□□□□ 0.84
NBPF4Q96M43 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 AC126915.1-201ENST00000522847 1038 ntBASIC20.29■□□□□ 0.84
NBPF4Q96M43 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 AC020914.3-201ENST00000594712 304 ntBASIC20.29■□□□□ 0.84
NBPF4Q96M43 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 OR10B1P-201ENST00000601666 907 ntBASIC20.29■□□□□ 0.84
NBPF4Q96M43 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NBPF4Q96M43 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF4Q96M43 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.28■□□□□ 0.84
NBPF4Q96M43 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 AC106872.11-201ENST00000605838 421 ntBASIC20.28■□□□□ 0.84
NBPF4Q96M43 AC244157.2-201ENST00000616239 1006 ntBASIC20.28■□□□□ 0.84
NBPF4Q96M43 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF4Q96M43 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
NBPF4Q96M43 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 AC079178.1-201ENST00000420915 656 ntBASIC20.27■□□□□ 0.84
NBPF4Q96M43 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 HLA-K-203ENST00000430151 1046 ntBASIC20.27■□□□□ 0.84
NBPF4Q96M43 NKAIN1P1-201ENST00000435754 582 ntBASIC20.27■□□□□ 0.84
NBPF4Q96M43 CHMP1AP1-201ENST00000445563 662 ntBASIC20.27■□□□□ 0.84
NBPF4Q96M43 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NBPF4Q96M43 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NBPF4Q96M43 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms