Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FO393412.1-201ENST00000619841 382 ntBASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 KRT8P21-201ENST00000430398 1491 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AL391280.1-201ENST00000506969 1062 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AP002490.2-201ENST00000524791 560 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AL118516.1-201ENST00000564152 670 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AC105137.3-201ENST00000617588 984 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 C2orf69P1-201ENST00000563532 1093 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AL031713.1-201ENST00000564813 661 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 MIR4683-201ENST00000579659 81 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 LINC01144-201ENST00000626198 1710 ntBASIC12.9□□□□□ -0.34
CCDC168Q8NDH2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.9□□□□□ -0.35
CCDC168Q8NDH2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCDC168Q8NDH2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCDC168Q8NDH2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCDC168Q8NDH2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 RNMTL1P1-201ENST00000454103 560 ntBASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 PHKG1P2-201ENST00000457537 863 ntBASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AC130709.1-201ENST00000484779 1212 ntBASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC168Q8NDH2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms