Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 AC022616.1-201ENST00000518688 554 ntBASIC24.02■■□□□ 1.44
VPS8Q8N3P4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 ENPP7P14-201ENST00000621765 1040 ntBASIC24.02■■□□□ 1.44
VPS8Q8N3P4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 AC132872.4-202ENST00000622924 2756 ntBASIC24.02■■□□□ 1.44
VPS8Q8N3P4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC138035.3-201ENST00000622706 2791 ntBASIC24.01■■□□□ 1.43
VPS8Q8N3P4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 CSF2RBP1-201ENST00000447905 391 ntBASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS8Q8N3P4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC24■■□□□ 1.43
VPS8Q8N3P4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
VPS8Q8N3P4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC24■■□□□ 1.43
VPS8Q8N3P4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 HLA-V-201ENST00000429037 534 ntBASIC24■■□□□ 1.43
VPS8Q8N3P4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC24■■□□□ 1.43
VPS8Q8N3P4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC24■■□□□ 1.43
VPS8Q8N3P4 RPS2P32-201ENST00000439199 892 ntBASIC24■■□□□ 1.43
VPS8Q8N3P4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC24■■□□□ 1.43
VPS8Q8N3P4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC24■■□□□ 1.43
VPS8Q8N3P4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC24■■□□□ 1.43
VPS8Q8N3P4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms