Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 AL161772.1-201ENST00000610494 4412 ntBASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 MIR1233-2-201ENST00000408138 82 ntBASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 MIR1233-1-201ENST00000408722 82 ntBASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 Z92544.3-201ENST00000624747 417 ntBASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 MYO15B-237ENST00000642007 4893 ntBASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 AGAP7P-201ENST00000582299 2062 ntBASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 AGAP14-201ENST00000624701 2060 ntBASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL3Q8IVW4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AC023824.1-201ENST00000562945 2975 ntBASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 RN7SL618P-201ENST00000477850 296 ntBASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AC125807.1-201ENST00000483097 614 ntBASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 AC015910.1-201ENST00000579400 975 ntBASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL3Q8IVW4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL3Q8IVW4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms