Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD2Q8IV50 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD2Q8IV50 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LYSMD2Q8IV50 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 AC019294.4-201ENST00000561777 2905 ntBASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 AL645939.2-201ENST00000427340 991 ntBASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 AL160237.2-201ENST00000556165 472 ntBASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 AL121956.5-201ENST00000625261 221 ntBASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD2Q8IV50 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 AC132008.2-207ENST00000454517 770 ntBASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 FAM86EP-206ENST00000510506 987 ntBASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 AL591684.3-201ENST00000605187 298 ntBASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 LINC01023-201ENST00000606054 436 ntBASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms