Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AC027612.1-201ENST00000445234 2395 ntBASIC13.06□□□□□ -0.32
ZNF546Q86UE3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AP001282.1-201ENST00000531301 1499 ntBASIC13.06□□□□□ -0.32
ZNF546Q86UE3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 ABCD1P5-201ENST00000445663 754 ntBASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF546Q86UE3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 TSSC2-201ENST00000450217 709 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 TOB2P1-201ENST00000469761 992 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 DUX4L26-201ENST00000489078 1255 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 LINC01023-201ENST00000606054 436 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AL121956.5-201ENST00000625261 221 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AL031595.1-201ENST00000623969 4709 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 DMBT1P1-203ENST00000636837 4628 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AC016734.2-201ENST00000624325 1377 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 AL122018.1-201ENST00000446607 2310 ntBASIC13.05□□□□□ -0.32
ZNF546Q86UE3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.05□□□□□ -0.32
ZNF546Q86UE3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms