Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 FO393414.2-201ENST00000405153 598 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 AC254562.1-201ENST00000417586 456 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 AL645939.2-201ENST00000427340 991 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 AC023824.1-201ENST00000562945 2975 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 AC026150.2-201ENST00000564693 1156 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 AC007967.4-201ENST00000614700 386 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 AC090616.6-203ENST00000579186 1945 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 DBET-201ENST00000630918 3363 ntBASIC10.38□□□□□ -0.75
SYCNQ0VAF6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYCNQ0VAF6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYCNQ0VAF6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms