Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 AL773604.1-201ENST00000617417 272 ntBASIC14.01□□□□□ -0.17
SCN1BQ07699 AC117500.6-201ENST00000624871 588 ntBASIC14.01□□□□□ -0.17
SCN1BQ07699 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.01□□□□□ -0.17
SCN1BQ07699 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 AC005622.1-201ENST00000636801 1703 ntBASIC14.01□□□□□ -0.17
SCN1BQ07699 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14□□□□□ -0.17
SCN1BQ07699 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 AC011477.6-201ENST00000604980 1927 ntBASIC14□□□□□ -0.17
SCN1BQ07699 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14□□□□□ -0.17
SCN1BQ07699 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
SCN1BQ07699 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 AL513480.1-201ENST00000451731 511 ntBASIC14□□□□□ -0.17
SCN1BQ07699 AC093909.1-201ENST00000504731 1122 ntBASIC14□□□□□ -0.17
SCN1BQ07699 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SCN1BQ07699 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14□□□□□ -0.17
SCN1BQ07699 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN1BQ07699 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14□□□□□ -0.17
SCN1BQ07699 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SCN1BQ07699 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.99□□□□□ -0.17
SCN1BQ07699 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.99□□□□□ -0.17
SCN1BQ07699 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SCN1BQ07699 AL031284.1-201ENST00000419297 478 ntBASIC13.99□□□□□ -0.17
SCN1BQ07699 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 AC108751.1-201ENST00000490852 363 ntBASIC13.99□□□□□ -0.17
SCN1BQ07699 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.99□□□□□ -0.17
SCN1BQ07699 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SCN1BQ07699 AL049840.3-201ENST00000602669 611 ntBASIC13.99□□□□□ -0.17
SCN1BQ07699 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.99□□□□□ -0.17
SCN1BQ07699 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.99□□□□□ -0.17
SCN1BQ07699 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN1BQ07699 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms