Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL16A1Q07092 BANF1P3-201ENST00000412556 261 ntBASIC20.34■□□□□ 0.85
COL16A1Q07092 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC20.34■□□□□ 0.85
COL16A1Q07092 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC20.34■□□□□ 0.85
COL16A1Q07092 AC106047.2-201ENST00000511723 743 ntBASIC20.34■□□□□ 0.85
COL16A1Q07092 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC20.34■□□□□ 0.85
COL16A1Q07092 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.34■□□□□ 0.85
COL16A1Q07092 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL16A1Q07092 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL16A1Q07092 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL16A1Q07092 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL16A1Q07092 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.33■□□□□ 0.85
COL16A1Q07092 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.33■□□□□ 0.85
COL16A1Q07092 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL16A1Q07092 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL16A1Q07092 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL16A1Q07092 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.33■□□□□ 0.85
COL16A1Q07092 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL16A1Q07092 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
COL16A1Q07092 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL16A1Q07092 DPY19L2P5-201ENST00000456300 331 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.33■□□□□ 0.84
COL16A1Q07092 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL16A1Q07092 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.33■□□□□ 0.84
COL16A1Q07092 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC20.33■□□□□ 0.84
COL16A1Q07092 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.33■□□□□ 0.84
COL16A1Q07092 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL16A1Q07092 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A21P-201ENST00000510875 1396 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A15P-201ENST00000514465 1395 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A6P-201ENST00000515148 1394 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A16P-201ENST00000526662 1395 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A9P-201ENST00000527940 1395 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A5P-201ENST00000528738 1395 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A14P-201ENST00000530386 1395 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 FAM90A13P-201ENST00000534703 1395 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
COL16A1Q07092 AC020910.5-201ENST00000623668 1865 ntBASIC20.33■□□□□ 0.84
COL16A1Q07092 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.33■□□□□ 0.84
COL16A1Q07092 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL16A1Q07092 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL16A1Q07092 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL16A1Q07092 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
COL16A1Q07092 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.32■□□□□ 0.84
COL16A1Q07092 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.32■□□□□ 0.84
COL16A1Q07092 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC20.32■□□□□ 0.84
COL16A1Q07092 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC20.32■□□□□ 0.84
COL16A1Q07092 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
COL16A1Q07092 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL16A1Q07092 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
COL16A1Q07092 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 AP001094.4-201ENST00000579008 2176 ntBASIC20.32■□□□□ 0.84
COL16A1Q07092 AC004554.1-201ENST00000422830 1468 ntBASIC20.32■□□□□ 0.84
COL16A1Q07092 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.32■□□□□ 0.84
COL16A1Q07092 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.32■□□□□ 0.84
COL16A1Q07092 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.32■□□□□ 0.84
COL16A1Q07092 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COL16A1Q07092 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL16A1Q07092 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COL16A1Q07092 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.31■□□□□ 0.84
COL16A1Q07092 AL512306.1-201ENST00000432698 848 ntBASIC20.31■□□□□ 0.84
COL16A1Q07092 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC20.31■□□□□ 0.84
COL16A1Q07092 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC20.31■□□□□ 0.84
COL16A1Q07092 AL135901.1-201ENST00000451812 333 ntBASIC20.31■□□□□ 0.84
COL16A1Q07092 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 RPS23-204ENST00000507980 836 ntTSL 2 BASIC20.31■□□□□ 0.84
COL16A1Q07092 AC008825.2-201ENST00000603374 718 ntBASIC20.31■□□□□ 0.84
COL16A1Q07092 AC009145.4-201ENST00000625119 1294 ntBASIC20.31■□□□□ 0.84
COL16A1Q07092 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COL16A1Q07092 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 ENPP7P8-202ENST00000527856 1345 ntBASIC20.31■□□□□ 0.84
COL16A1Q07092 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COL16A1Q07092 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL16A1Q07092 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.31■□□□□ 0.84
COL16A1Q07092 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms