Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.63■□□□□ 0.25
GCNT1Q02742 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.63■□□□□ 0.25
GCNT1Q02742 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.63■□□□□ 0.25
GCNT1Q02742 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
GCNT1Q02742 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.63■□□□□ 0.25
GCNT1Q02742 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.63■□□□□ 0.25
GCNT1Q02742 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GCNT1Q02742 WASH3P-207ENST00000560956 1394 ntBASIC16.63■□□□□ 0.25
GCNT1Q02742 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.63■□□□□ 0.25
GCNT1Q02742 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 DBET-201ENST00000630918 3363 ntBASIC16.62■□□□□ 0.25
GCNT1Q02742 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 MEP1AP4-201ENST00000423244 1087 ntBASIC16.62■□□□□ 0.25
GCNT1Q02742 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
GCNT1Q02742 AC036164.1-201ENST00000570544 333 ntBASIC16.62■□□□□ 0.25
GCNT1Q02742 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 AC011467.4-201ENST00000594891 528 ntBASIC16.62■□□□□ 0.25
GCNT1Q02742 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
GCNT1Q02742 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GCNT1Q02742 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GCNT1Q02742 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 AGAP7P-201ENST00000582299 2062 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 AGAP14-201ENST00000624701 2060 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.61■□□□□ 0.25
GCNT1Q02742 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.61■□□□□ 0.25
GCNT1Q02742 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.61■□□□□ 0.25
GCNT1Q02742 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
GCNT1Q02742 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.61■□□□□ 0.25
GCNT1Q02742 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GCNT1Q02742 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.61■□□□□ 0.25
GCNT1Q02742 UGT1A2P-201ENST00000454886 866 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 GAPDHP40-201ENST00000505218 1006 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.61■□□□□ 0.25
GCNT1Q02742 TPRX2P-201ENST00000535362 881 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.61■□□□□ 0.25
GCNT1Q02742 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.61■□□□□ 0.25
GCNT1Q02742 AC023310.3-201ENST00000557027 670 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.61■□□□□ 0.25
GCNT1Q02742 AC100756.1-201ENST00000562736 682 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 RRP7BP-205ENST00000566851 833 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms