Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.58■□□□□ 0.4
TPM4P67936 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
TPM4P67936 AC009947.1-201ENST00000444350 727 ntBASIC17.58■□□□□ 0.4
TPM4P67936 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TPM4P67936 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TPM4P67936 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TPM4P67936 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.58■□□□□ 0.4
TPM4P67936 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.58■□□□□ 0.4
TPM4P67936 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM4P67936 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.58■□□□□ 0.4
TPM4P67936 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TPM4P67936 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TPM4P67936 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM4P67936 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM4P67936 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TPM4P67936 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM4P67936 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM4P67936 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TPM4P67936 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.58■□□□□ 0.4
TPM4P67936 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 C8orf49-201ENST00000525043 1968 ntBASIC17.57■□□□□ 0.4
TPM4P67936 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TPM4P67936 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.57■□□□□ 0.4
TPM4P67936 AC105233.2-201ENST00000523697 349 ntBASIC17.57■□□□□ 0.4
TPM4P67936 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 AF228730.5-201ENST00000530288 346 ntBASIC17.57■□□□□ 0.4
TPM4P67936 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TPM4P67936 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.57■□□□□ 0.4
TPM4P67936 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.57■□□□□ 0.4
TPM4P67936 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.57■□□□□ 0.4
TPM4P67936 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TPM4P67936 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPM4P67936 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TPM4P67936 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.56■□□□□ 0.4
TPM4P67936 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TPM4P67936 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TPM4P67936 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 BCAR1-209ENST00000546196 1340 ntBASIC17.56■□□□□ 0.4
TPM4P67936 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TPM4P67936 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 RPS8P6-201ENST00000426177 609 ntBASIC17.56■□□□□ 0.4
TPM4P67936 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TPM4P67936 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM4P67936 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms