Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 AC074051.2-201ENST00000565115 352 ntBASIC13.47□□□□□ -0.25
AP3S2P59780 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.47□□□□□ -0.25
AP3S2P59780 AL591684.3-201ENST00000605187 298 ntBASIC13.47□□□□□ -0.25
AP3S2P59780 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 REXO1L2P-201ENST00000425429 2069 ntBASIC13.47□□□□□ -0.25
AP3S2P59780 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 AL928921.2-201ENST00000641325 2442 ntBASIC13.47□□□□□ -0.25
AP3S2P59780 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S2P59780 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S2P59780 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S2P59780 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 AC079781.5-202ENST00000641784 3743 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
AP3S2P59780 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 RCN1P1-201ENST00000400413 996 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 RPL5P21-201ENST00000404620 815 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 AC063952.2-201ENST00000498792 1227 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 AC104819.1-201ENST00000504587 486 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.46□□□□□ -0.25
AP3S2P59780 TPSP2-201ENST00000561760 610 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 MIR4515-201ENST00000584082 81 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
AP3S2P59780 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 AC006011.2-201ENST00000621313 1158 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 AC097493.4-201ENST00000641197 219 ntBASIC13.46□□□□□ -0.25
AP3S2P59780 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S2P59780 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S2P59780 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
AP3S2P59780 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S2P59780 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
AP3S2P59780 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.46□□□□□ -0.26
AP3S2P59780 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.46□□□□□ -0.26
AP3S2P59780 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S2P59780 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.46□□□□□ -0.26
AP3S2P59780 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
AP3S2P59780 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S2P59780 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S2P59780 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms