Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H2P55055 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.91□□□□□ -0.02
NR1H2P55055 IGLL3P-201ENST00000412472 434 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 AC254562.1-201ENST00000417586 456 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 HTR5BP-201ENST00000430851 1154 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H2P55055 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NR1H2P55055 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H2P55055 MIR4469-201ENST00000583919 79 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H2P55055 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.91□□□□□ -0.02
NR1H2P55055 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 AC023141.13-201ENST00000604991 943 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 AC010507.1-201ENST00000633895 436 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 AC087386.2-201ENST00000623212 4637 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NR1H2P55055 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H2P55055 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 BCAR1-209ENST00000546196 1340 ntBASIC14.91□□□□□ -0.02
NR1H2P55055 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NR1H2P55055 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H2P55055 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NR1H2P55055 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.9□□□□□ -0.02
NR1H2P55055 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.9□□□□□ -0.02
NR1H2P55055 ACTG1P14-201ENST00000446382 1122 ntBASIC14.9□□□□□ -0.02
NR1H2P55055 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
NR1H2P55055 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H2P55055 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.9□□□□□ -0.02
NR1H2P55055 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H2P55055 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 AC004877.2-201ENST00000623941 599 ntBASIC14.9□□□□□ -0.02
NR1H2P55055 AC092865.6-201ENST00000642101 219 ntBASIC14.9□□□□□ -0.02
NR1H2P55055 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H2P55055 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NR1H2P55055 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 MBLAC2-202ENST00000514906 1936 ntBASIC14.9□□□□□ -0.02
NR1H2P55055 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 AL590787.1-201ENST00000568856 1315 ntBASIC14.9□□□□□ -0.02
NR1H2P55055 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H2P55055 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H2P55055 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H2P55055 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 LINC01230-201ENST00000625222 3017 ntBASIC14.89□□□□□ -0.03
NR1H2P55055 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H2P55055 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H2P55055 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
NR1H2P55055 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.89□□□□□ -0.03
NR1H2P55055 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms