Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PDE1AP54750 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE1AP54750 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PDE1AP54750 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PDE1AP54750 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.01■□□□□ 0.63
PDE1AP54750 UGT1A2P-201ENST00000454886 866 ntBASIC19.01■□□□□ 0.63
PDE1AP54750 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE1AP54750 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE1AP54750 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.01■□□□□ 0.63
PDE1AP54750 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE1AP54750 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.01■□□□□ 0.63
PDE1AP54750 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.01■□□□□ 0.63
PDE1AP54750 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.01■□□□□ 0.63
PDE1AP54750 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.01■□□□□ 0.63
PDE1AP54750 AL645728.2-202ENST00000641679 227 ntBASIC19.01■□□□□ 0.63
PDE1AP54750 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDE1AP54750 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.01■□□□□ 0.63
PDE1AP54750 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE1AP54750 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE1AP54750 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PDE1AP54750 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDE1AP54750 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDE1AP54750 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 AC104457.1-201ENST00000401024 814 ntBASIC19■□□□□ 0.63
PDE1AP54750 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19■□□□□ 0.63
PDE1AP54750 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19■□□□□ 0.63
PDE1AP54750 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19■□□□□ 0.63
PDE1AP54750 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PDE1AP54750 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19■□□□□ 0.63
PDE1AP54750 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE1AP54750 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDE1AP54750 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19■□□□□ 0.63
PDE1AP54750 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDE1AP54750 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE1AP54750 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.99■□□□□ 0.63
PDE1AP54750 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.99■□□□□ 0.63
PDE1AP54750 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 AC023310.3-201ENST00000557027 670 ntBASIC18.99■□□□□ 0.63
PDE1AP54750 AC100756.1-201ENST00000562736 682 ntBASIC18.99■□□□□ 0.63
PDE1AP54750 AC138749.3-201ENST00000567691 622 ntBASIC18.99■□□□□ 0.63
PDE1AP54750 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE1AP54750 AC116165.1-201ENST00000611806 668 ntBASIC18.99■□□□□ 0.63
PDE1AP54750 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
PDE1AP54750 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE1AP54750 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 ZBED1P1-201ENST00000502364 1930 ntBASIC18.99■□□□□ 0.63
PDE1AP54750 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.99■□□□□ 0.63
PDE1AP54750 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE1AP54750 AP000845.1-201ENST00000581677 2131 ntBASIC18.98■□□□□ 0.63
PDE1AP54750 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE1AP54750 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE1AP54750 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms