Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HCFC1P51610 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.5□□□□□ -0.25
HCFC1P51610 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
HCFC1P51610 POM121L8P-201ENST00000417732 1281 ntBASIC13.5□□□□□ -0.25
HCFC1P51610 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.5□□□□□ -0.25
HCFC1P51610 POM121L9P-203ENST00000441984 1285 ntBASIC13.5□□□□□ -0.25
HCFC1P51610 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.5□□□□□ -0.25
HCFC1P51610 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.5□□□□□ -0.25
HCFC1P51610 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 GAPDHP40-201ENST00000505218 1006 ntBASIC13.5□□□□□ -0.25
HCFC1P51610 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.5□□□□□ -0.25
HCFC1P51610 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.5□□□□□ -0.25
HCFC1P51610 MIR4741-201ENST00000579822 90 ntBASIC13.5□□□□□ -0.25
HCFC1P51610 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.5□□□□□ -0.25
HCFC1P51610 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.5□□□□□ -0.25
HCFC1P51610 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HCFC1P51610 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.5□□□□□ -0.25
HCFC1P51610 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HCFC1P51610 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 MIR648-201ENST00000385046 94 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 ELK2AP-201ENST00000392510 1007 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.49□□□□□ -0.25
HCFC1P51610 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 FAM8A4P-201ENST00000435433 1213 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 AL391280.1-201ENST00000506969 1062 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.49□□□□□ -0.25
HCFC1P51610 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
HCFC1P51610 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.49□□□□□ -0.25
HCFC1P51610 AC005730.2-201ENST00000564549 1184 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 RN7SL190P-201ENST00000582519 257 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 AC073413.1-201ENST00000603927 732 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 KRT8P35-201ENST00000483942 1338 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HCFC1P51610 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HCFC1P51610 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
HCFC1P51610 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
HCFC1P51610 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.49□□□□□ -0.25
HCFC1P51610 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 FAM197Y7-201ENST00000432892 766 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
HCFC1P51610 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.49□□□□□ -0.25
HCFC1P51610 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.49□□□□□ -0.25
HCFC1P51610 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HCFC1P51610 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.49□□□□□ -0.25
HCFC1P51610 AL365203.3-201ENST00000609742 2057 ntBASIC13.49□□□□□ -0.25
HCFC1P51610 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HCFC1P51610 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HCFC1P51610 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HCFC1P51610 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HCFC1P51610 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HCFC1P51610 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms