Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RNF144AP50876 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RNF144AP50876 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.59□□□□□ -0.07
RNF144AP50876 TREML5P-201ENST00000421694 576 ntBASIC14.59□□□□□ -0.07
RNF144AP50876 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 HIST3H2BA-201ENST00000436555 524 ntBASIC14.59□□□□□ -0.07
RNF144AP50876 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 DUX4L27-201ENST00000554796 1261 ntBASIC14.59□□□□□ -0.07
RNF144AP50876 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RNF144AP50876 AC006538.3-201ENST00000612495 578 ntBASIC14.59□□□□□ -0.07
RNF144AP50876 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.59□□□□□ -0.07
RNF144AP50876 AL138828.2-201ENST00000615812 383 ntBASIC14.59□□□□□ -0.07
RNF144AP50876 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 AL136379.1-201ENST00000623471 2642 ntBASIC14.59□□□□□ -0.07
RNF144AP50876 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 CETN4P-206ENST00000642099 2168 ntBASIC14.58□□□□□ -0.07
RNF144AP50876 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF144AP50876 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RNF144AP50876 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RNF144AP50876 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.58□□□□□ -0.07
RNF144AP50876 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.58□□□□□ -0.07
RNF144AP50876 TMBIM7P-203ENST00000641617 1718 ntBASIC14.58□□□□□ -0.07
RNF144AP50876 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RNF144AP50876 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 AL080243.2-201ENST00000418783 582 ntBASIC14.58□□□□□ -0.08
RNF144AP50876 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF144AP50876 CNN2P2-201ENST00000443536 909 ntBASIC14.58□□□□□ -0.08
RNF144AP50876 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF144AP50876 CNN2P3-201ENST00000450201 906 ntBASIC14.58□□□□□ -0.08
RNF144AP50876 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF144AP50876 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.58□□□□□ -0.08
RNF144AP50876 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF144AP50876 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF144AP50876 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF144AP50876 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.58□□□□□ -0.08
RNF144AP50876 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
RNF144AP50876 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF144AP50876 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 AL136317.3-201ENST00000618497 906 ntBASIC14.58□□□□□ -0.08
RNF144AP50876 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 AC006486.2-201ENST00000624246 2199 ntBASIC14.58□□□□□ -0.08
RNF144AP50876 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RNF144AP50876 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RNF144AP50876 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RNF144AP50876 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RNF144AP50876 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RNF144AP50876 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF144AP50876 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF144AP50876 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF144AP50876 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
RNF144AP50876 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF144AP50876 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms