Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LHX2P50458 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.88□□□□□ -0.19
LHX2P50458 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.88□□□□□ -0.19
LHX2P50458 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LHX2P50458 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 RPL5P21-201ENST00000404620 815 ntBASIC13.88□□□□□ -0.19
LHX2P50458 BAATP1-201ENST00000412284 1225 ntBASIC13.88□□□□□ -0.19
LHX2P50458 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.88□□□□□ -0.19
LHX2P50458 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.88□□□□□ -0.19
LHX2P50458 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.88□□□□□ -0.19
LHX2P50458 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 AP001889.1-201ENST00000525414 633 ntBASIC13.88□□□□□ -0.19
LHX2P50458 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.88□□□□□ -0.19
LHX2P50458 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.88□□□□□ -0.19
LHX2P50458 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.88□□□□□ -0.19
LHX2P50458 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LHX2P50458 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.88□□□□□ -0.19
LHX2P50458 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.88□□□□□ -0.19
LHX2P50458 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.88□□□□□ -0.19
LHX2P50458 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.88□□□□□ -0.19
LHX2P50458 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LHX2P50458 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 AC090616.6-203ENST00000579186 1945 ntBASIC13.88□□□□□ -0.19
LHX2P50458 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.87□□□□□ -0.19
LHX2P50458 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 MSTO2P-201ENST00000314835 1709 ntBASIC13.87□□□□□ -0.19
LHX2P50458 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LHX2P50458 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 AC005229.1-201ENST00000392885 409 ntBASIC13.87□□□□□ -0.19
LHX2P50458 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.87□□□□□ -0.19
LHX2P50458 AC012441.1-201ENST00000446669 685 ntBASIC13.87□□□□□ -0.19
LHX2P50458 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.87□□□□□ -0.19
LHX2P50458 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.87□□□□□ -0.19
LHX2P50458 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 AC022137.2-201ENST00000503482 481 ntBASIC13.87□□□□□ -0.19
LHX2P50458 IGHV3-71-201ENST00000523324 359 ntBASIC13.87□□□□□ -0.19
LHX2P50458 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.87□□□□□ -0.19
LHX2P50458 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.87□□□□□ -0.19
LHX2P50458 AL512343.1-201ENST00000605837 169 ntBASIC13.87□□□□□ -0.19
LHX2P50458 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.87□□□□□ -0.19
LHX2P50458 BX539320.1-201ENST00000623759 877 ntBASIC13.87□□□□□ -0.19
LHX2P50458 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.87□□□□□ -0.19
LHX2P50458 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LHX2P50458 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.87□□□□□ -0.19
LHX2P50458 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LHX2P50458 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.87□□□□□ -0.19
LHX2P50458 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.86□□□□□ -0.19
LHX2P50458 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.86□□□□□ -0.19
LHX2P50458 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
LHX2P50458 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
LHX2P50458 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LHX2P50458 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.86□□□□□ -0.19
LHX2P50458 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LHX2P50458 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LHX2P50458 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.86□□□□□ -0.19
LHX2P50458 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms