Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGCLP35914 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 RPL13AP25-201ENST00000484130 612 ntBASIC15.51■□□□□ 0.07
HMGCLP35914 AC104596.2-201ENST00000512793 793 ntBASIC15.51■□□□□ 0.07
HMGCLP35914 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGCLP35914 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGCLP35914 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGCLP35914 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HMGCLP35914 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 AC138035.3-201ENST00000622706 2791 ntBASIC15.51■□□□□ 0.07
HMGCLP35914 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HMGCLP35914 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HMGCLP35914 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
HMGCLP35914 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCLP35914 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HMGCLP35914 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGCLP35914 GAPDHP40-201ENST00000505218 1006 ntBASIC15.5■□□□□ 0.07
HMGCLP35914 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.5■□□□□ 0.07
HMGCLP35914 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCLP35914 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HMGCLP35914 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
HMGCLP35914 BRI3BPP1-201ENST00000594224 787 ntBASIC15.5■□□□□ 0.07
HMGCLP35914 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCLP35914 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCLP35914 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCLP35914 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGCLP35914 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HMGCLP35914 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HMGCLP35914 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGCLP35914 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCLP35914 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 AL442647.2-201ENST00000429864 857 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGCLP35914 AC123567.1-201ENST00000548294 1261 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 CHCHD2P3-201ENST00000603038 451 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 TMEM261P1-201ENST00000604899 340 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 AL662799.1-202ENST00000614205 422 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 MIR8072-201ENST00000614241 80 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGCLP35914 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HMGCLP35914 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 DRD5P1-201ENST00000456605 1438 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HMGCLP35914 AC006486.2-201ENST00000624246 2199 ntBASIC15.49■□□□□ 0.07
HMGCLP35914 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCLP35914 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms