Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CICP24-201ENST00000605464 2705 ntBASIC14.37□□□□□ -0.11
SHC1P29353 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.37□□□□□ -0.11
SHC1P29353 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.37□□□□□ -0.11
SHC1P29353 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 AC106881.1-201ENST00000605849 3329 ntBASIC14.36□□□□□ -0.11
SHC1P29353 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SHC1P29353 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.36□□□□□ -0.11
SHC1P29353 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.36□□□□□ -0.11
SHC1P29353 HMGN1P19-201ENST00000436976 333 ntBASIC14.36□□□□□ -0.11
SHC1P29353 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.36□□□□□ -0.11
SHC1P29353 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.36□□□□□ -0.11
SHC1P29353 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.36□□□□□ -0.11
SHC1P29353 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 AC004890.2-204ENST00000481968 304 ntBASIC14.36□□□□□ -0.11
SHC1P29353 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.36□□□□□ -0.11
SHC1P29353 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.36□□□□□ -0.11
SHC1P29353 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.36□□□□□ -0.11
SHC1P29353 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SHC1P29353 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SHC1P29353 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SHC1P29353 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHC1P29353 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.36□□□□□ -0.11
SHC1P29353 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
SHC1P29353 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHC1P29353 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHC1P29353 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SHC1P29353 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.35□□□□□ -0.11
SHC1P29353 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.35□□□□□ -0.11
SHC1P29353 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.35□□□□□ -0.11
SHC1P29353 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.35□□□□□ -0.11
SHC1P29353 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.35□□□□□ -0.11
SHC1P29353 UGT1A2P-201ENST00000454886 866 ntBASIC14.35□□□□□ -0.11
SHC1P29353 RN7SL618P-201ENST00000477850 296 ntBASIC14.35□□□□□ -0.11
SHC1P29353 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SHC1P29353 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.35□□□□□ -0.11
SHC1P29353 HNRNPUP1-201ENST00000554987 333 ntBASIC14.35□□□□□ -0.11
SHC1P29353 AC009407.1-201ENST00000568958 598 ntBASIC14.35□□□□□ -0.11
SHC1P29353 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.35□□□□□ -0.11
SHC1P29353 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.35□□□□□ -0.11
SHC1P29353 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.35□□□□□ -0.11
SHC1P29353 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHC1P29353 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.35□□□□□ -0.11
SHC1P29353 AC087499.5-201ENST00000452760 1342 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms