Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CD40P25942 BOLA2P3-201ENST00000404566 256 ntBASIC13.43□□□□□ -0.26
CD40P25942 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.43□□□□□ -0.26
CD40P25942 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CD40P25942 AC068587.3-201ENST00000526613 355 ntBASIC13.43□□□□□ -0.26
CD40P25942 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 AL022328.1-201ENST00000610050 478 ntBASIC13.43□□□□□ -0.26
CD40P25942 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.43□□□□□ -0.26
CD40P25942 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.43□□□□□ -0.26
CD40P25942 AC005252.2-201ENST00000624630 1141 ntBASIC13.43□□□□□ -0.26
CD40P25942 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CD40P25942 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CD40P25942 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.42□□□□□ -0.26
CD40P25942 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.42□□□□□ -0.26
CD40P25942 AC127383.1-201ENST00000444697 1800 ntBASIC13.42□□□□□ -0.26
CD40P25942 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.42□□□□□ -0.26
CD40P25942 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 GAPDHP40-201ENST00000505218 1006 ntBASIC13.42□□□□□ -0.26
CD40P25942 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.42□□□□□ -0.26
CD40P25942 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.42□□□□□ -0.26
CD40P25942 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.42□□□□□ -0.26
CD40P25942 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 MIR6752-201ENST00000618442 71 ntBASIC13.42□□□□□ -0.26
CD40P25942 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.42□□□□□ -0.26
CD40P25942 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.42□□□□□ -0.26
CD40P25942 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.42□□□□□ -0.26
CD40P25942 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.42□□□□□ -0.26
CD40P25942 AC026691.1-201ENST00000602502 2017 ntBASIC13.42□□□□□ -0.26
CD40P25942 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 PRAL-201ENST00000624952 3286 ntBASIC13.42□□□□□ -0.26
CD40P25942 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms