Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.2□□□□□ -0.3
COL8A2P25067 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.19□□□□□ -0.3
COL8A2P25067 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
COL8A2P25067 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 TSPY26P-202ENST00000565928 3884 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
COL8A2P25067 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.19□□□□□ -0.3
COL8A2P25067 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.19□□□□□ -0.3
COL8A2P25067 ATP5G2P4-201ENST00000442175 420 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
COL8A2P25067 GPR53P-205ENST00000457298 1084 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.19□□□□□ -0.3
COL8A2P25067 VDAC1P7-201ENST00000462417 847 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.19□□□□□ -0.3
COL8A2P25067 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 AL049840.4-201ENST00000602422 811 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
COL8A2P25067 CU634019.7-201ENST00000624153 1185 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 FP236241.2-201ENST00000624906 1185 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.19□□□□□ -0.3
COL8A2P25067 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.19□□□□□ -0.3
COL8A2P25067 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.19□□□□□ -0.3
COL8A2P25067 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.19□□□□□ -0.3
COL8A2P25067 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.19□□□□□ -0.3
COL8A2P25067 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.19□□□□□ -0.3
COL8A2P25067 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.19□□□□□ -0.3
COL8A2P25067 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COL8A2P25067 AC022188.1-201ENST00000620960 1664 ntBASIC13.18□□□□□ -0.3
COL8A2P25067 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.18□□□□□ -0.3
COL8A2P25067 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.18□□□□□ -0.3
COL8A2P25067 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 KRT18P43-201ENST00000469825 1281 ntBASIC13.18□□□□□ -0.3
COL8A2P25067 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 IGHV3-71-201ENST00000523324 359 ntBASIC13.18□□□□□ -0.3
COL8A2P25067 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.18□□□□□ -0.3
COL8A2P25067 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.18□□□□□ -0.3
COL8A2P25067 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 AL359881.2-201ENST00000602973 570 ntBASIC13.18□□□□□ -0.3
COL8A2P25067 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms