Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC3P19447 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC3P19447 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC3P19447 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC3P19447 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC3P19447 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ERCC3P19447 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC3P19447 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.1■□□□□ 0.49
ERCC3P19447 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC3P19447 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC3P19447 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC3P19447 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 AC007950.2-201ENST00000615045 2347 ntBASIC18.09■□□□□ 0.49
ERCC3P19447 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC3P19447 MIR1908-201ENST00000410394 80 ntBASIC18.09■□□□□ 0.49
ERCC3P19447 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.09■□□□□ 0.49
ERCC3P19447 CSF2RBP1-201ENST00000447905 391 ntBASIC18.09■□□□□ 0.49
ERCC3P19447 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC3P19447 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC3P19447 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC3P19447 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ERCC3P19447 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC3P19447 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.09■□□□□ 0.49
ERCC3P19447 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 AL513523.2-202ENST00000427283 2040 ntBASIC18.09■□□□□ 0.49
ERCC3P19447 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC3P19447 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
ERCC3P19447 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC3P19447 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC3P19447 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.08■□□□□ 0.49
ERCC3P19447 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.08■□□□□ 0.49
ERCC3P19447 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.08■□□□□ 0.49
ERCC3P19447 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.08■□□□□ 0.49
ERCC3P19447 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
ERCC3P19447 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC3P19447 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC3P19447 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC3P19447 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
ERCC3P19447 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ERCC3P19447 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 AC092933.1-201ENST00000393644 945 ntBASIC18.08■□□□□ 0.48
ERCC3P19447 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ERCC3P19447 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ERCC3P19447 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.08■□□□□ 0.48
ERCC3P19447 RPL7P3-201ENST00000441388 714 ntBASIC18.08■□□□□ 0.48
ERCC3P19447 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC3P19447 FAM8A2P-201ENST00000528813 1142 ntBASIC18.08■□□□□ 0.48
ERCC3P19447 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC3P19447 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.08■□□□□ 0.48
ERCC3P19447 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.08■□□□□ 0.48
ERCC3P19447 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.08■□□□□ 0.48
ERCC3P19447 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms