Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN1P18031 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 C1QBPP1-201ENST00000400117 770 ntBASIC16.5■□□□□ 0.23
PTPN1P18031 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN1P18031 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN1P18031 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
PTPN1P18031 GAPDHP40-201ENST00000505218 1006 ntBASIC16.5■□□□□ 0.23
PTPN1P18031 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN1P18031 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN1P18031 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN1P18031 AC239800.4-201ENST00000603712 296 ntBASIC16.5■□□□□ 0.23
PTPN1P18031 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN1P18031 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN1P18031 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PTPN1P18031 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 AC090616.6-203ENST00000579186 1945 ntBASIC16.49■□□□□ 0.23
PTPN1P18031 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN1P18031 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 SOCS2P1-201ENST00000417727 557 ntBASIC16.49■□□□□ 0.23
PTPN1P18031 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PTPN1P18031 AL162726.2-201ENST00000438986 1017 ntBASIC16.49■□□□□ 0.23
PTPN1P18031 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN1P18031 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN1P18031 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN1P18031 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 ENPP7P5-201ENST00000541031 1031 ntBASIC16.49■□□□□ 0.23
PTPN1P18031 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN1P18031 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN1P18031 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN1P18031 CU634019.7-201ENST00000624153 1185 ntBASIC16.49■□□□□ 0.23
PTPN1P18031 FP236241.2-201ENST00000624906 1185 ntBASIC16.49■□□□□ 0.23
PTPN1P18031 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.49■□□□□ 0.23
PTPN1P18031 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTPN1P18031 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN1P18031 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN1P18031 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN1P18031 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PTPN1P18031 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN1P18031 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN1P18031 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.48■□□□□ 0.23
PTPN1P18031 GIMAP3P-201ENST00000495150 836 ntBASIC16.48■□□□□ 0.23
PTPN1P18031 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.48■□□□□ 0.23
PTPN1P18031 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN1P18031 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
PTPN1P18031 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.48■□□□□ 0.23
PTPN1P18031 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 AC093813.1-201ENST00000605066 256 ntBASIC16.48■□□□□ 0.23
PTPN1P18031 AC107373.2-201ENST00000607735 490 ntBASIC16.48■□□□□ 0.23
PTPN1P18031 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN1P18031 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN1P18031 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PTPN1P18031 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms