Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 HLA-H-201ENST00000383620 1096 ntBASIC13.29□□□□□ -0.28
HIST1H1DP16402 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 AC136604.1-201ENST00000418535 575 ntBASIC13.29□□□□□ -0.28
HIST1H1DP16402 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 KRT18P2-201ENST00000447938 1258 ntBASIC13.29□□□□□ -0.28
HIST1H1DP16402 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 AL135744.1-201ENST00000565098 629 ntBASIC13.29□□□□□ -0.28
HIST1H1DP16402 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H1DP16402 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H1DP16402 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 AC139749.1-202ENST00000617529 3139 ntBASIC13.28□□□□□ -0.28
HIST1H1DP16402 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 AL607033.1-201ENST00000623900 1599 ntBASIC13.28□□□□□ -0.28
HIST1H1DP16402 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 MRPL3P1-201ENST00000400109 1033 ntBASIC13.28□□□□□ -0.28
HIST1H1DP16402 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 AC145285.3-201ENST00000564603 959 ntBASIC13.28□□□□□ -0.28
HIST1H1DP16402 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 ACE3P-201ENST00000423435 1973 ntBASIC13.28□□□□□ -0.28
HIST1H1DP16402 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 AC084364.1-201ENST00000551967 1556 ntBASIC13.28□□□□□ -0.28
HIST1H1DP16402 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H1DP16402 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H1DP16402 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms