Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL031284.1-201ENST00000419297 478 ntBASIC17.29■□□□□ 0.36
TPM1P09493 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.29■□□□□ 0.36
TPM1P09493 RNA5SP415-201ENST00000517246 115 ntBASIC17.29■□□□□ 0.36
TPM1P09493 AC105233.2-201ENST00000523697 349 ntBASIC17.29■□□□□ 0.36
TPM1P09493 AF228730.5-201ENST00000530288 346 ntBASIC17.29■□□□□ 0.36
TPM1P09493 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
TPM1P09493 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM1P09493 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 AC061975.2-201ENST00000581722 295 ntBASIC17.29■□□□□ 0.36
TPM1P09493 AL450472.2-201ENST00000603663 1156 ntBASIC17.29■□□□□ 0.36
TPM1P09493 MIR7706-201ENST00000613747 67 ntBASIC17.29■□□□□ 0.36
TPM1P09493 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM1P09493 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TPM1P09493 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM1P09493 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM1P09493 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM1P09493 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM1P09493 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM1P09493 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM1P09493 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM1P09493 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.28■□□□□ 0.36
TPM1P09493 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 AC023024.2-201ENST00000623561 1993 ntBASIC17.28■□□□□ 0.36
TPM1P09493 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TPM1P09493 AC007686.3-201ENST00000619017 3487 ntBASIC17.28■□□□□ 0.36
TPM1P09493 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TPM1P09493 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.28■□□□□ 0.36
TPM1P09493 AC002056.1-201ENST00000395613 760 ntBASIC17.28■□□□□ 0.36
TPM1P09493 AC073389.1-201ENST00000595595 795 ntBASIC17.28■□□□□ 0.36
TPM1P09493 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.28■□□□□ 0.36
TPM1P09493 AC116407.3-201ENST00000623905 1129 ntBASIC17.28■□□□□ 0.36
TPM1P09493 AC004877.2-201ENST00000623941 599 ntBASIC17.28■□□□□ 0.36
TPM1P09493 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TPM1P09493 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM1P09493 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TPM1P09493 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TPM1P09493 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM1P09493 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TPM1P09493 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM1P09493 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM1P09493 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TPM1P09493 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms