Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 GPS2P2-201ENST00000430745 888 ntBASIC15.19■□□□□ 0.02
KRT6AP02538 SPDYE14P-201ENST00000442619 822 ntBASIC15.19■□□□□ 0.02
KRT6AP02538 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
KRT6AP02538 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 AC010327.4-202ENST00000591484 748 ntBASIC15.19■□□□□ 0.02
KRT6AP02538 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT6AP02538 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT6AP02538 AC148477.4-201ENST00000613430 1793 ntBASIC15.19■□□□□ 0.02
KRT6AP02538 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT6AP02538 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRT6AP02538 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT6AP02538 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
KRT6AP02538 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KRT6AP02538 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 RPL5P21-201ENST00000404620 815 ntBASIC15.18■□□□□ 0.02
KRT6AP02538 SPDYE7P-202ENST00000420373 878 ntBASIC15.18■□□□□ 0.02
KRT6AP02538 UPF3AP3-201ENST00000420996 769 ntBASIC15.18■□□□□ 0.02
KRT6AP02538 MTND6P24-201ENST00000440466 518 ntBASIC15.18■□□□□ 0.02
KRT6AP02538 AC023141.5-201ENST00000458585 616 ntBASIC15.18■□□□□ 0.02
KRT6AP02538 AC112482.1-201ENST00000492080 688 ntBASIC15.18■□□□□ 0.02
KRT6AP02538 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT6AP02538 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT6AP02538 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT6AP02538 KRT8P12-202ENST00000472924 1397 ntBASIC15.18■□□□□ 0.02
KRT6AP02538 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT6AP02538 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6AP02538 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6AP02538 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.17■□□□□ 0.02
KRT6AP02538 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT6AP02538 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6AP02538 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT6AP02538 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT6AP02538 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT6AP02538 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6AP02538 RPSAP43-201ENST00000402237 625 ntBASIC15.17■□□□□ 0.02
KRT6AP02538 AC211486.1-202ENST00000416371 468 ntBASIC15.17■□□□□ 0.02
KRT6AP02538 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 AP000347.1-202ENST00000435868 847 ntBASIC15.17■□□□□ 0.02
KRT6AP02538 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6AP02538 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6AP02538 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms