Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CXCL13O43927 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCL13O43927 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCL13O43927 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.96□□□□□ -0.17
CXCL13O43927 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CXCL13O43927 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCL13O43927 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.96□□□□□ -0.17
CXCL13O43927 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.96□□□□□ -0.17
CXCL13O43927 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCL13O43927 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 VDAC1P7-201ENST00000462417 847 ntBASIC13.96□□□□□ -0.17
CXCL13O43927 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.96□□□□□ -0.17
CXCL13O43927 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 AC005225.4-201ENST00000557330 545 ntBASIC13.96□□□□□ -0.17
CXCL13O43927 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.96□□□□□ -0.17
CXCL13O43927 WFDC1-204ENST00000613603 549 ntBASIC13.96□□□□□ -0.17
CXCL13O43927 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCL13O43927 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
CXCL13O43927 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CXCL13O43927 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CXCL13O43927 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CXCL13O43927 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CXCL13O43927 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CXCL13O43927 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CXCL13O43927 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CXCL13O43927 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CXCL13O43927 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 AC098614.1-201ENST00000368528 745 ntBASIC13.95□□□□□ -0.18
CXCL13O43927 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.95□□□□□ -0.18
CXCL13O43927 RN7SL752P-201ENST00000463779 287 ntBASIC13.95□□□□□ -0.18
CXCL13O43927 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CXCL13O43927 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 BRI3BPP1-201ENST00000594224 787 ntBASIC13.95□□□□□ -0.18
CXCL13O43927 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 AC012645.4-201ENST00000610691 1061 ntBASIC13.95□□□□□ -0.18
CXCL13O43927 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCL13O43927 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCL13O43927 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms