Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.15■□□□□ 0.98
NINLQ9Y2I6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 AC105250.1-201ENST00000509378 2057 ntBASIC21.14■□□□□ 0.98
NINLQ9Y2I6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 FAM197Y7-201ENST00000432892 766 ntBASIC21.14■□□□□ 0.98
NINLQ9Y2I6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.14■□□□□ 0.98
NINLQ9Y2I6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NINLQ9Y2I6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 DKFZP434H168-201ENST00000567381 1905 ntBASIC21.13■□□□□ 0.97
NINLQ9Y2I6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 AC108725.1-201ENST00000495472 409 ntBASIC21.13■□□□□ 0.97
NINLQ9Y2I6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 MIR3615-201ENST00000581999 87 ntBASIC21.13■□□□□ 0.97
NINLQ9Y2I6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NINLQ9Y2I6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 MIR1247-201ENST00000408206 136 ntBASIC21.12■□□□□ 0.97
NINLQ9Y2I6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 RNA5SP486-201ENST00000515961 83 ntBASIC21.12■□□□□ 0.97
NINLQ9Y2I6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NINLQ9Y2I6 AC078819.1-201ENST00000547454 765 ntBASIC21.12■□□□□ 0.97
NINLQ9Y2I6 AC012085.1-201ENST00000548270 765 ntBASIC21.12■□□□□ 0.97
NINLQ9Y2I6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms