Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 AC006480.2-201ENST00000609770 1337 ntBASIC20.93■□□□□ 0.94
PHF8Q9UPP1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PHF8Q9UPP1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 AC055811.4-201ENST00000624039 1754 ntBASIC20.92■□□□□ 0.94
PHF8Q9UPP1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 AC069218.1-201ENST00000435269 762 ntBASIC20.92■□□□□ 0.94
PHF8Q9UPP1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 AC008267.1-201ENST00000474858 1069 ntBASIC20.92■□□□□ 0.94
PHF8Q9UPP1 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 RN7SL163P-201ENST00000583100 276 ntBASIC20.92■□□□□ 0.94
PHF8Q9UPP1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 AC004899.1-201ENST00000424687 1714 ntBASIC20.92■□□□□ 0.94
PHF8Q9UPP1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHF8Q9UPP1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 MARK2P5-201ENST00000507649 634 ntBASIC20.91■□□□□ 0.94
PHF8Q9UPP1 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 AC068587.8-201ENST00000641239 219 ntBASIC20.91■□□□□ 0.94
PHF8Q9UPP1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHF8Q9UPP1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 GHSR-202ENST00000427970 912 ntBASIC20.9■□□□□ 0.94
PHF8Q9UPP1 TUBB8P8-201ENST00000458717 1058 ntBASIC20.9■□□□□ 0.94
PHF8Q9UPP1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 DUX4L47-201ENST00000566374 394 ntBASIC20.9■□□□□ 0.94
PHF8Q9UPP1 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 MIR4683-201ENST00000579659 81 ntBASIC20.9■□□□□ 0.94
PHF8Q9UPP1 AC005324.6-201ENST00000587972 613 ntBASIC20.9■□□□□ 0.94
PHF8Q9UPP1 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 AL162426.1-201ENST00000624141 743 ntBASIC20.9■□□□□ 0.94
PHF8Q9UPP1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHF8Q9UPP1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms