Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC024270.1-201ENST00000559181 404 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC022662.1-201ENST00000580252 331 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 SCML2P1-201ENST00000584511 1100 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 TEX26-AS1-210ENST00000588726 841 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 IGHV3-79-201ENST00000618968 341 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ING4-218ENST00000619641 1280 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC022784.8-201ENST00000623764 559 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 RARRES2P11-201ENST00000635158 484 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC009220.2-201ENST00000489759 1751 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 TDG-201ENST00000266775 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC087289.5-201ENST00000586076 3175 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC116562.4-201ENST00000641316 2276 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 TMC3-AS1-207ENST00000642113 2043 ntBASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-3Q9BYR6 ERG-211ENST00000453032 1595 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 PKD1P6-201ENST00000343738 4769 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 CALCB-201ENST00000324229 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 ZNF343-202ENST00000358413 771 ntTSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AL139400.1-201ENST00000366220 510 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 Y_RNA.452-201ENST00000384202 108 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 MIR572-201ENST00000384983 95 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00993-201ENST00000420453 540 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AL513533.1-201ENST00000453728 415 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 RPS27AP2-201ENST00000457576 465 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC093663.2-201ENST00000484625 313 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AK2-208ENST00000487289 920 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AADAC-202ENST00000488869 719 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 RNU6-1028P-201ENST00000517164 93 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC090821.1-201ENST00000517380 1041 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 RFPL4AP7-201ENST00000520120 215 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC090772.2-201ENST00000578443 564 ntTSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 MTCYBP13-201ENST00000578634 1093 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC005828.2-201ENST00000580253 562 ntTSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC100830.2-201ENST00000581636 240 ntBASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-3Q9BYR6 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms