Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AC009407.1-201ENST00000568958 598 ntBASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 CICP11-201ENST00000434745 2827 ntBASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 RPL5P21-201ENST00000404620 815 ntBASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 TSPY16P-201ENST00000449843 468 ntBASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 AL512638.1-201ENST00000457493 794 ntBASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH19Q8TAB3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 AC002472.2-201ENST00000442739 958 ntBASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms