Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AC005962.1-201ENST00000584100 773 ntBASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AC105250.1-201ENST00000509378 2057 ntBASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 MAGEA5-201ENST00000446757 942 ntBASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 AL133466.1-201ENST00000447582 150 ntBASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 IQSEC3P1-201ENST00000538799 536 ntBASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.33□□□□□ -0.11
COL27A1Q8IZC6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 KLF2P1-201ENST00000447438 1042 ntBASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 FAM90A7P-201ENST00000382628 1395 ntBASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 FAM90A23P-201ENST00000400136 1395 ntBASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL27A1Q8IZC6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 MBLAC2-202ENST00000514906 1936 ntBASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 RN7SKP214-201ENST00000364208 315 ntBASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 AL136301.1-201ENST00000615830 422 ntBASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 PCDH8P1-201ENST00000428983 2773 ntBASIC14.32□□□□□ -0.12
COL27A1Q8IZC6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms