Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RFX4Q33E94 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 RNA5SP419-201ENST00000515908 135 ntBASIC14.61□□□□□ -0.07
RFX4Q33E94 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.61□□□□□ -0.07
RFX4Q33E94 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.61□□□□□ -0.07
RFX4Q33E94 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.61□□□□□ -0.07
RFX4Q33E94 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.61□□□□□ -0.07
RFX4Q33E94 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 C8orf49-201ENST00000525043 1968 ntBASIC14.61□□□□□ -0.07
RFX4Q33E94 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RFX4Q33E94 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.61□□□□□ -0.07
RFX4Q33E94 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RFX4Q33E94 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.6□□□□□ -0.07
RFX4Q33E94 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.6□□□□□ -0.07
RFX4Q33E94 AC079776.4-201ENST00000511039 504 ntBASIC14.6□□□□□ -0.07
RFX4Q33E94 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.6□□□□□ -0.07
RFX4Q33E94 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.6□□□□□ -0.07
RFX4Q33E94 AP001005.1-201ENST00000571755 1248 ntBASIC14.6□□□□□ -0.07
RFX4Q33E94 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 AC126335.2-201ENST00000623362 4637 ntBASIC14.6□□□□□ -0.07
RFX4Q33E94 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RFX4Q33E94 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.6□□□□□ -0.07
RFX4Q33E94 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 PMS2P7-201ENST00000506558 1336 ntBASIC14.6□□□□□ -0.07
RFX4Q33E94 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RFX4Q33E94 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFX4Q33E94 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
RFX4Q33E94 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms