Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SCN1BQ07699 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
SCN1BQ07699 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.02□□□□□ -0.16
SCN1BQ07699 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.02□□□□□ -0.16
SCN1BQ07699 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.02□□□□□ -0.16
SCN1BQ07699 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.02□□□□□ -0.16
SCN1BQ07699 AC012569.1-201ENST00000591191 1524 ntBASIC14.02□□□□□ -0.16
SCN1BQ07699 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN1BQ07699 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 KRT8P44-201ENST00000441609 1350 ntBASIC14.02□□□□□ -0.17
SCN1BQ07699 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.02□□□□□ -0.17
SCN1BQ07699 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SCN1BQ07699 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.02□□□□□ -0.17
SCN1BQ07699 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SCN1BQ07699 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.02□□□□□ -0.17
SCN1BQ07699 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.02□□□□□ -0.17
SCN1BQ07699 HCG4-201ENST00000418983 998 ntBASIC14.02□□□□□ -0.17
SCN1BQ07699 AL450487.1-201ENST00000426799 995 ntBASIC14.02□□□□□ -0.17
SCN1BQ07699 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.02□□□□□ -0.17
SCN1BQ07699 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.02□□□□□ -0.17
SCN1BQ07699 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.02□□□□□ -0.17
SCN1BQ07699 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.02□□□□□ -0.17
SCN1BQ07699 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SCN1BQ07699 AL031008.1-201ENST00000619963 541 ntBASIC14.02□□□□□ -0.17
SCN1BQ07699 AL691432.3-201ENST00000621860 400 ntBASIC14.02□□□□□ -0.17
SCN1BQ07699 FAM215A-202ENST00000632077 792 ntBASIC14.02□□□□□ -0.17
SCN1BQ07699 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SCN1BQ07699 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN1BQ07699 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SCN1BQ07699 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SCN1BQ07699 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.01□□□□□ -0.17
SCN1BQ07699 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 AC136759.1-202ENST00000530858 2194 ntBASIC14.01□□□□□ -0.17
SCN1BQ07699 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN1BQ07699 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN1BQ07699 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.01□□□□□ -0.17
SCN1BQ07699 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN1BQ07699 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms