Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.29□□□□□ -0.12
CXCR4P61073 AC098831.1-202ENST00000438821 336 ntBASIC14.29□□□□□ -0.12
CXCR4P61073 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 KRT18P56-201ENST00000507275 550 ntBASIC14.29□□□□□ -0.12
CXCR4P61073 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.29□□□□□ -0.12
CXCR4P61073 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 AC011467.4-201ENST00000594891 528 ntBASIC14.29□□□□□ -0.12
CXCR4P61073 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 AC010507.1-201ENST00000633895 436 ntBASIC14.29□□□□□ -0.12
CXCR4P61073 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 PMS2P7-201ENST00000506558 1336 ntBASIC14.29□□□□□ -0.12
CXCR4P61073 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CXCR4P61073 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
CXCR4P61073 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCR4P61073 AC092474.2-201ENST00000424288 719 ntBASIC14.28□□□□□ -0.12
CXCR4P61073 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCR4P61073 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCR4P61073 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 AL049840.3-201ENST00000602669 611 ntBASIC14.28□□□□□ -0.12
CXCR4P61073 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 MIR7706-201ENST00000613747 67 ntBASIC14.28□□□□□ -0.12
CXCR4P61073 AL773604.1-201ENST00000617417 272 ntBASIC14.28□□□□□ -0.12
CXCR4P61073 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 AL359183.1-201ENST00000623796 2132 ntBASIC14.28□□□□□ -0.12
CXCR4P61073 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCR4P61073 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCR4P61073 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CXCR4P61073 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.28□□□□□ -0.12
CXCR4P61073 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCR4P61073 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CXCR4P61073 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCR4P61073 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CXCR4P61073 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
CXCR4P61073 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCR4P61073 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CXCR4P61073 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 LINC01230-201ENST00000625222 3017 ntBASIC14.27□□□□□ -0.12
CXCR4P61073 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCR4P61073 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCR4P61073 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms