Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
WNT3AP56704 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
WNT3AP56704 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 AL121723.1-201ENST00000445194 1519 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 AC138969.3-201ENST00000546612 1459 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 AC138932.2-201ENST00000548268 1459 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 AC126755.4-201ENST00000549796 1459 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.79■□□□□ 0.12
WNT3AP56704 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
WNT3AP56704 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
WNT3AP56704 RPL5P21-201ENST00000404620 815 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 MRPS18AP1-201ENST00000414458 589 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 KRT18P43-201ENST00000469825 1281 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.79■□□□□ 0.12
WNT3AP56704 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 AC027796.2-201ENST00000575326 344 ntBASIC15.79■□□□□ 0.12
WNT3AP56704 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.79■□□□□ 0.12
WNT3AP56704 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
WNT3AP56704 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.79■□□□□ 0.12
WNT3AP56704 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
WNT3AP56704 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WNT3AP56704 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.79■□□□□ 0.12
WNT3AP56704 AC126365.1-201ENST00000578585 1514 ntBASIC15.78■□□□□ 0.12
WNT3AP56704 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
WNT3AP56704 AC067930.6-201ENST00000623257 4947 ntBASIC15.78■□□□□ 0.12
WNT3AP56704 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.78■□□□□ 0.12
WNT3AP56704 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
WNT3AP56704 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
WNT3AP56704 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.78■□□□□ 0.12
WNT3AP56704 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 AL589987.1-201ENST00000453380 819 ntBASIC15.78■□□□□ 0.12
WNT3AP56704 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.78■□□□□ 0.12
WNT3AP56704 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
WNT3AP56704 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.78■□□□□ 0.12
WNT3AP56704 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.78■□□□□ 0.12
WNT3AP56704 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms