Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 BANF1P1-201ENST00000553684 263 ntBASIC14.26□□□□□ -0.13
HMGA2P52926 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGA2P52926 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGA2P52926 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 AC027601.4-201ENST00000611259 610 ntBASIC14.26□□□□□ -0.13
HMGA2P52926 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGA2P52926 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HMGA2P52926 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGA2P52926 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.25□□□□□ -0.13
HMGA2P52926 ACTG1P14-201ENST00000446382 1122 ntBASIC14.25□□□□□ -0.13
HMGA2P52926 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGA2P52926 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 AC106730.1-201ENST00000566722 1090 ntBASIC14.25□□□□□ -0.13
HMGA2P52926 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.25□□□□□ -0.13
HMGA2P52926 AC105021.1-202ENST00000570572 669 ntBASIC14.25□□□□□ -0.13
HMGA2P52926 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.25□□□□□ -0.13
HMGA2P52926 AC055717.3-201ENST00000622967 595 ntBASIC14.25□□□□□ -0.13
HMGA2P52926 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGA2P52926 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGA2P52926 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGA2P52926 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 AC113367.3-201ENST00000508316 1912 ntBASIC14.25□□□□□ -0.13
HMGA2P52926 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 AC012508.2-201ENST00000567613 1472 ntBASIC14.25□□□□□ -0.13
HMGA2P52926 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGA2P52926 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGA2P52926 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
HMGA2P52926 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGA2P52926 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGA2P52926 AC067930.6-201ENST00000623257 4947 ntBASIC14.24□□□□□ -0.13
HMGA2P52926 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMGA2P52926 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HMGA2P52926 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGA2P52926 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.24□□□□□ -0.13
HMGA2P52926 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGA2P52926 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGA2P52926 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGA2P52926 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGA2P52926 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGA2P52926 AC069335.1-201ENST00000489972 472 ntBASIC14.24□□□□□ -0.13
HMGA2P52926 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms