Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC079178.1-201ENST00000420915 656 ntBASIC13.52□□□□□ -0.25
HCFC1P51610 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.52□□□□□ -0.25
HCFC1P51610 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.52□□□□□ -0.25
HCFC1P51610 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.52□□□□□ -0.25
HCFC1P51610 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 RPSAP36-202ENST00000494591 1261 ntBASIC13.52□□□□□ -0.25
HCFC1P51610 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.52□□□□□ -0.25
HCFC1P51610 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HCFC1P51610 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.52□□□□□ -0.25
HCFC1P51610 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.52□□□□□ -0.25
HCFC1P51610 AC015967.2-201ENST00000624092 234 ntBASIC13.52□□□□□ -0.25
HCFC1P51610 AC006435.4-201ENST00000625037 234 ntBASIC13.52□□□□□ -0.25
HCFC1P51610 AL356737.1-201ENST00000634391 234 ntBASIC13.52□□□□□ -0.25
HCFC1P51610 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.52□□□□□ -0.25
HCFC1P51610 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.52□□□□□ -0.25
HCFC1P51610 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HCFC1P51610 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.52□□□□□ -0.25
HCFC1P51610 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HCFC1P51610 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.51□□□□□ -0.25
HCFC1P51610 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.51□□□□□ -0.25
HCFC1P51610 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.51□□□□□ -0.25
HCFC1P51610 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.51□□□□□ -0.25
HCFC1P51610 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.51□□□□□ -0.25
HCFC1P51610 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.51□□□□□ -0.25
HCFC1P51610 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
HCFC1P51610 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
HCFC1P51610 AP006547.1-201ENST00000563435 692 ntBASIC13.51□□□□□ -0.25
HCFC1P51610 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.51□□□□□ -0.25
HCFC1P51610 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.51□□□□□ -0.25
HCFC1P51610 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.51□□□□□ -0.25
HCFC1P51610 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.51□□□□□ -0.25
HCFC1P51610 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HCFC1P51610 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
HCFC1P51610 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.51□□□□□ -0.25
HCFC1P51610 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.51□□□□□ -0.25
HCFC1P51610 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.51□□□□□ -0.25
HCFC1P51610 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.51□□□□□ -0.25
HCFC1P51610 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.51□□□□□ -0.25
HCFC1P51610 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.51□□□□□ -0.25
HCFC1P51610 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.51□□□□□ -0.25
HCFC1P51610 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.51□□□□□ -0.25
HCFC1P51610 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.51□□□□□ -0.25
HCFC1P51610 ECM1P1-201ENST00000604092 1279 ntBASIC13.51□□□□□ -0.25
HCFC1P51610 AC132938.4-201ENST00000623835 848 ntBASIC13.51□□□□□ -0.25
HCFC1P51610 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
HCFC1P51610 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.51□□□□□ -0.25
HCFC1P51610 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
HCFC1P51610 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HCFC1P51610 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HCFC1P51610 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms