Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.8□□□□□ -0.2
CX3CR1P49238 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.8□□□□□ -0.2
CX3CR1P49238 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CX3CR1P49238 AL645939.2-201ENST00000427340 991 ntBASIC13.8□□□□□ -0.2
CX3CR1P49238 AC112482.1-201ENST00000492080 688 ntBASIC13.8□□□□□ -0.2
CX3CR1P49238 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.8□□□□□ -0.2
CX3CR1P49238 BANF1P1-201ENST00000553684 263 ntBASIC13.8□□□□□ -0.2
CX3CR1P49238 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 AC097359.3-201ENST00000603982 1210 ntBASIC13.8□□□□□ -0.2
CX3CR1P49238 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CX3CR1P49238 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CX3CR1P49238 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CX3CR1P49238 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
CX3CR1P49238 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CX3CR1P49238 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.79□□□□□ -0.2
CX3CR1P49238 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CX3CR1P49238 RPSAP43-201ENST00000402237 625 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 UPF3AP3-201ENST00000420996 769 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 GPS2P2-201ENST00000430745 888 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 MTND6P24-201ENST00000440466 518 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 SPDYE14P-201ENST00000442619 822 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 AC023141.5-201ENST00000458585 616 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.79□□□□□ -0.2
CX3CR1P49238 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 AC026150.2-201ENST00000564693 1156 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CX3CR1P49238 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.79□□□□□ -0.2
CX3CR1P49238 MIR6080-201ENST00000617359 66 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 AC009093.7-201ENST00000623853 1223 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.79□□□□□ -0.2
CX3CR1P49238 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 AL607033.1-201ENST00000623900 1599 ntBASIC13.79□□□□□ -0.2
CX3CR1P49238 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CX3CR1P49238 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CR1P49238 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CX3CR1P49238 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.78□□□□□ -0.2
CX3CR1P49238 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CR1P49238 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CX3CR1P49238 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms