Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF3O95398 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF3O95398 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF3O95398 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF3O95398 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF3O95398 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF3O95398 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 RPL18AP3-201ENST00000462885 528 ntBASIC22.87■■□□□ 1.25
RAPGEF3O95398 NDUFS6P1-201ENST00000485187 316 ntBASIC22.87■■□□□ 1.25
RAPGEF3O95398 REEP5-205ENST00000504247 480 ntTSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 NSD1-211ENST00000511258 809 ntTSL 3 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF3O95398 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF3O95398 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF3O95398 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC22.87■■□□□ 1.25
RAPGEF3O95398 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 MIR648-201ENST00000385046 94 ntBASIC22.86■■□□□ 1.25
RAPGEF3O95398 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 AC026320.2-201ENST00000434379 478 ntBASIC22.86■■□□□ 1.25
RAPGEF3O95398 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 DNM1P51-201ENST00000558149 522 ntBASIC22.86■■□□□ 1.25
RAPGEF3O95398 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 AP001527.2-201ENST00000614441 631 ntBASIC22.86■■□□□ 1.25
RAPGEF3O95398 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 AC244394.1-201ENST00000435000 1665 ntBASIC22.86■■□□□ 1.25
RAPGEF3O95398 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 AC136759.1-202ENST00000530858 2194 ntBASIC22.86■■□□□ 1.25
RAPGEF3O95398 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RAPGEF3O95398 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPGEF3O95398 KRT8P21-201ENST00000430398 1491 ntBASIC22.85■■□□□ 1.25
RAPGEF3O95398 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC22.85■■□□□ 1.25
RAPGEF3O95398 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
RAPGEF3O95398 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 AMT-239ENST00000636865 1914 ntTSL 5 BASIC22.85■■□□□ 1.25
RAPGEF3O95398 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
RAPGEF3O95398 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC22.85■■□□□ 1.25
RAPGEF3O95398 C2orf69P1-201ENST00000563532 1093 ntBASIC22.85■■□□□ 1.25
RAPGEF3O95398 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC22.85■■□□□ 1.25
RAPGEF3O95398 AC138466.4-201ENST00000623965 852 ntBASIC22.85■■□□□ 1.25
RAPGEF3O95398 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAPGEF3O95398 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 PGR-209ENST00000617858 2816 ntTSL 5 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 RNF146-211ENST00000609447 607 ntTSL 4 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms